---
ontology: EDAM (1.12)
topic:
  - Genetic variation
  - Mapping
scopes:
  - name: summary
    function:
      - Read mapping
      - SNP calling
    inputs:
      - data: Sequence
        formats: [FASTA, FASTQ]
    outputs:
      - data: Alignment
        formats: [SAM]
      - data: Sequence features
        formats: [GFF]
