Source: maq
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Andreas Tille <tille@debian.org>,
 Charles Plessy <plessy@debian.org>
Build-Depends: debhelper (>= 9), autotools-dev, zlib1g-dev, dh-autoreconf
Standards-Version: 3.9.3
Homepage: http://maq.sourceforge.net/
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/maq/trunk/
Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/maq/trunk/

Package: maq
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Suggests: bwa, samtools
Description: maps short fixed-length polymorphic DNA sequence reads to reference sequences
 Maq (short for Mapping and Assembly with Quality) builds mapping assemblies
 from short reads generated by the next-generation sequencing machines. It was
 particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a
 preliminary functionality to handle ABI SOLiD data. Maq is previously known as
 mapass2.
 .
 Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.
