From: Michael R. Crusoe <michael.crusoe@gmail.com>
Subject: Fix typos
Index: cnvkit/cnvlib/commands.py
===================================================================
--- cnvkit.orig/cnvlib/commands.py
+++ cnvkit/cnvlib/commands.py
@@ -169,7 +169,7 @@ P_batch.add_argument('-p', '--processes'
                 parallel. Without an argument, use the maximum number of
                 available CPUs. [Default: process each BAM in serial]""")
 P_batch.add_argument("--rscript-path", metavar="PATH", default="Rscript",
-        help="""Path to the Rscript excecutable to use for running R code.
+        help="""Path to the Rscript executable to use for running R code.
                 Use this option to specify a non-default R installation.
                 [Default: %(default)s]""")
 
@@ -668,7 +668,7 @@ P_segment.add_argument("--drop-outliers"
                 Set to 0 for no outlier filtering.
                 [Default: %(default)g]""")
 P_segment.add_argument("--rscript-path", metavar="PATH", default="Rscript",
-        help="""Path to the Rscript excecutable to use for running R code.
+        help="""Path to the Rscript executable to use for running R code.
                 Use this option to specify a non-default R installation.
                 [Default: %(default)s]""")
 P_segment.add_argument('-p', '--processes',
